ゲノム解読論文まとめ（２）

今回は高等植物特集。

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.).
Jain M, Misra G, Patel RK, Priya P, Jhanwar S, Khan AW, Shah N, Singh VK, Garg R, Jeena G, Yadav M, Kant C, Sharma P, Yadav G, Bhatia S, Tyagi AK, Chattopadhyay D.
Plant J. 2013 Mar 12. doi: 10.1111/tpj.12173. [Epub ahead of print]
PMID: 23489434 [PubMed - as supplied by publisher]
ヒヨコマメのゲノム報告論文。

Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution.
Chen J, Huang Q, Gao D, Wang J, Lang Y, Liu T, Li B, Bai Z, Luis Goicoechea J, Liang C, Chen C, Zhang W, Sun S, Liao Y, Zhang X, Yang L, Song C, Wang M, Shi J, Liu G, Liu J, Zhou H, Zhou W, Yu Q, An N, Chen Y, Cai Q, Wang B, Liu B, Min J, Huang Y, Wu H, Li Z, Zhang Y, Yin Y, Song W, Jiang J, Jackson SA, Wing RA, Wang J, Chen M.
Nat Commun. 2013;4:1595. doi: 10.1038/ncomms2596.
PMID: 23481403 [PubMed - in process]
野生の稲のゲノム報告論文。

The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)
Peng Z, Lu Y, Li L, Zhao Q, Feng Q, Gao Z, Lu H, Hu T, Yao N, Liu K, Li Y, Fan D, Guo Y, Li W, Lu Y, Weng Q, Zhou C, Zhang L, Huang T, Zhao Y, Zhu C, Liu X, Yang X, Wang T, Miao K, Zhuang C, Cao X, Tang W, Liu G, Liu Y, Chen J, Liu Z, Yuan L, Liu Z, Huang X, Lu T, Fei B, Ning Z, Han B, Jiang Z.
Nat Genet. 2013 Apr;45(4):456-61. doi: 10.1038/ng.2569. Epub 2013 Feb 24.
PMID: 23435089 [PubMed - in process]
孟宗竹のゲノム報告論文。

Draft genome of the wheat A-genome progenitor Triticum urartu
Ling HQ, Zhao S, Liu D, Wang J, Sun H, Zhang C, Fan H, Li D, Dong L, Tao Y, Gao C, Wu H, Li Y, Cui Y, Guo X, Zheng S, Wang B, Yu K, Liang Q, Yang W, Lou X, Chen J, Feng M, Jian J, Zhang X, Luo G, Jiang Y, Liu J, Wang Z, Sha Y, Zhang B, Wu H, Tang D, Shen Q, Xue P, Zou S, Wang X, Liu X, Wang F, Yang Y, An X, Dong Z, Zhang K, Zhang X, Luo MC, Dvorak J, Tong Y, Wang J, Yang H, Li Z, Wang D, Zhang A, Wang J.
Nature. 2013 Apr 4;496(7443):87-90. doi: 10.1038/nature11997. Epub 2013 Mar 24.
PMID: 23535596 [PubMed - indexed for MEDLINE]
コムギのAゲノムの起源であるウラルツコムギのゲノム報告論文。

Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu P, Wang J, Zou H, Zhang R, Xu J, Gao J, Middleton C, Quan Z, Liu G, Wang J; International Wheat Genome Sequencing Consortium, Yang H, Liu X, He Z, Mao L, Wang J.
Nature. 2013 Apr 4;496(7443):91-5. doi: 10.1038/nature12028. Epub 2013 Mar 24.
PMID: 23535592 [PubMed - indexed for MEDLINE]
コムギのDゲノムの起源であるタルホコムギのゲノム報告論文。ゲノムの66%が転移因子由来で、特に3−400万年前に増幅したと報告されています。